Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 DUX4L4-201ENST00000566884 1269 ntBASIC21.21■□□□□ 0.99
ZNF888P0CJ79 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF888P0CJ79 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ZNF888P0CJ79 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZNF888P0CJ79 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 DUSP8P3-201ENST00000399571 1760 ntBASIC21.19■□□□□ 0.98
ZNF888P0CJ79 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 AC092171.4-201ENST00000609130 632 ntBASIC21.19■□□□□ 0.98
ZNF888P0CJ79 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF888P0CJ79 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.18■□□□□ 0.98
ZNF888P0CJ79 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF888P0CJ79 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF888P0CJ79 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.16■□□□□ 0.98
ZNF888P0CJ79 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 pRNA.6-201ENST00000610482 90 ntBASIC21.16■□□□□ 0.98
ZNF888P0CJ79 pRNA.5-201ENST00000612139 90 ntBASIC21.16■□□□□ 0.98
ZNF888P0CJ79 pRNA.11-201ENST00000618423 90 ntBASIC21.16■□□□□ 0.98
ZNF888P0CJ79 pRNA.13-201ENST00000619112 90 ntBASIC21.16■□□□□ 0.98
ZNF888P0CJ79 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF888P0CJ79 SYT6-210ENST00000641643 1587 ntBASIC21.15■□□□□ 0.98
ZNF888P0CJ79 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.15■□□□□ 0.98
ZNF888P0CJ79 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 DUX4L19-201ENST00000557448 1267 ntBASIC21.15■□□□□ 0.98
ZNF888P0CJ79 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF888P0CJ79 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF888P0CJ79 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF888P0CJ79 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF888P0CJ79 SERBP1P1-201ENST00000396021 1160 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms