Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Polr2aP08775 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Polr2aP08775 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Polr2aP08775 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.2■■□□□ 1.31
Polr2aP08775 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Polr2aP08775 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Polr2aP08775 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.2■■□□□ 1.3
Polr2aP08775 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Polr2aP08775 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.19■■□□□ 1.3
Polr2aP08775 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Polr2aP08775 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Polr2aP08775 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.19■■□□□ 1.3
Polr2aP08775 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.19■■□□□ 1.3
Polr2aP08775 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Polr2aP08775 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Polr2aP08775 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Polr2aP08775 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Polr2aP08775 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.18■■□□□ 1.3
Polr2aP08775 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Polr2aP08775 Gm13168-201ENSMUST00000121771 632 ntBASIC23.18■■□□□ 1.3
Polr2aP08775 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Polr2aP08775 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Polr2aP08775 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.18■■□□□ 1.3
Polr2aP08775 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Polr2aP08775 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.18■■□□□ 1.3
Polr2aP08775 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Polr2aP08775 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Polr2aP08775 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Polr2aP08775 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.16■■□□□ 1.3
Polr2aP08775 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Polr2aP08775 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.16■■□□□ 1.3
Polr2aP08775 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.16■■□□□ 1.3
Polr2aP08775 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Polr2aP08775 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Polr2aP08775 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Polr2aP08775 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Polr2aP08775 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.14■■□□□ 1.3
Polr2aP08775 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Polr2aP08775 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.14■■□□□ 1.3
Polr2aP08775 Gm6211-202ENSMUST00000167849 925 ntBASIC23.14■■□□□ 1.3
Polr2aP08775 Mir6236-201ENSMUST00000184437 123 ntBASIC23.14■■□□□ 1.3
Polr2aP08775 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Polr2aP08775 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Polr2aP08775 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.14■■□□□ 1.29
Polr2aP08775 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Polr2aP08775 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Polr2aP08775 Gm13146-201ENSMUST00000118508 780 ntBASIC23.13■■□□□ 1.29
Polr2aP08775 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Polr2aP08775 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
Polr2aP08775 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Polr2aP08775 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Polr2aP08775 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
Polr2aP08775 Gm5408-201ENSMUST00000197998 747 ntBASIC23.12■■□□□ 1.29
Polr2aP08775 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
Polr2aP08775 Gm6365-201ENSMUST00000054711 744 ntBASIC23.12■■□□□ 1.29
Polr2aP08775 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Polr2aP08775 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.12■■□□□ 1.29
Polr2aP08775 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Polr2aP08775 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.12■■□□□ 1.29
Polr2aP08775 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Polr2aP08775 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Polr2aP08775 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Polr2aP08775 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Polr2aP08775 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Polr2aP08775 Gm7290-201ENSMUST00000104990 617 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Gm12918-201ENSMUST00000120234 636 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Gm15710-201ENSMUST00000121821 636 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Gm5075-201ENSMUST00000196916 622 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Polr2aP08775 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Polr2aP08775 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.1■■□□□ 1.29
Polr2aP08775 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Polr2aP08775 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Polr2aP08775 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Polr2aP08775 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms