Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 AC011551.1-201ENST00000614101 683 ntBASIC18.54■□□□□ 0.56
CTSDP07339 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.54■□□□□ 0.56
CTSDP07339 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CTSDP07339 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSDP07339 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.53■□□□□ 0.56
CTSDP07339 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSDP07339 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSDP07339 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CTSDP07339 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSDP07339 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSDP07339 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTSDP07339 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.52■□□□□ 0.56
CTSDP07339 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSDP07339 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 AL137060.1-201ENST00000618151 2648 ntBASIC18.52■□□□□ 0.56
CTSDP07339 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSDP07339 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTSDP07339 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTSDP07339 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTSDP07339 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CTSDP07339 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSDP07339 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTSDP07339 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSDP07339 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSDP07339 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSDP07339 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSDP07339 SPCS2P3-201ENST00000500401 656 ntBASIC18.5■□□□□ 0.55
CTSDP07339 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSDP07339 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSDP07339 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTSDP07339 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSDP07339 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSDP07339 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTSDP07339 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.49■□□□□ 0.55
CTSDP07339 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSDP07339 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSDP07339 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CTSDP07339 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CTSDP07339 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 AL353803.4-201ENST00000565882 1934 ntBASIC18.48■□□□□ 0.55
CTSDP07339 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSDP07339 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSDP07339 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSDP07339 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTSDP07339 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CTSDP07339 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTSDP07339 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CTSDP07339 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CTSDP07339 LONRF2P2-201ENST00000439212 571 ntBASIC18.47■□□□□ 0.55
CTSDP07339 AL592293.1-201ENST00000502889 1188 ntBASIC18.47■□□□□ 0.55
CTSDP07339 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSDP07339 MIR6765-201ENST00000614092 87 ntBASIC18.47■□□□□ 0.55
CTSDP07339 AC080038.3-201ENST00000623346 1952 ntBASIC18.47■□□□□ 0.55
CTSDP07339 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSDP07339 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSDP07339 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms