Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Hdac1O09106 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.82■■□□□ 1.4
Hdac1O09106 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Hdac1O09106 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac1O09106 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Hdac1O09106 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac1O09106 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac1O09106 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Hdac1O09106 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC23.8■■□□□ 1.4
Hdac1O09106 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac1O09106 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Hdac1O09106 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.8■■□□□ 1.4
Hdac1O09106 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.79■■□□□ 1.4
Hdac1O09106 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Hdac1O09106 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac1O09106 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac1O09106 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.79■■□□□ 1.4
Hdac1O09106 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac1O09106 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Hdac1O09106 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.78■■□□□ 1.4
Hdac1O09106 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac1O09106 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac1O09106 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac1O09106 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac1O09106 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Hdac1O09106 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac1O09106 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac1O09106 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac1O09106 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac1O09106 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Hdac1O09106 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.76■■□□□ 1.39
Hdac1O09106 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Hdac1O09106 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac1O09106 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac1O09106 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac1O09106 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.74■■□□□ 1.39
Hdac1O09106 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac1O09106 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac1O09106 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac1O09106 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac1O09106 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.73■■□□□ 1.39
Hdac1O09106 Mir6236-201ENSMUST00000184437 123 ntBASIC23.73■■□□□ 1.39
Hdac1O09106 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac1O09106 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac1O09106 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Hdac1O09106 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac1O09106 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.73■■□□□ 1.39
Hdac1O09106 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac1O09106 Gm40881-201ENSMUST00000223397 166 ntBASIC23.72■■□□□ 1.39
Hdac1O09106 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac1O09106 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.72■■□□□ 1.39
Hdac1O09106 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac1O09106 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac1O09106 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac1O09106 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Hdac1O09106 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac1O09106 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac1O09106 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac1O09106 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.71■■□□□ 1.39
Hdac1O09106 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hdac1O09106 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hdac1O09106 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac1O09106 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Hdac1O09106 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac1O09106 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.7■■□□□ 1.38
Hdac1O09106 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Hdac1O09106 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac1O09106 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Hdac1O09106 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hdac1O09106 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hdac1O09106 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Hdac1O09106 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hdac1O09106 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hdac1O09106 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Hdac1O09106 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hdac1O09106 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms