Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lonrf1D3YY23 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.54■□□□□ 0.88
Lonrf1D3YY23 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lonrf1D3YY23 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lonrf1D3YY23 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lonrf1D3YY23 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lonrf1D3YY23 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lonrf1D3YY23 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lonrf1D3YY23 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Iqck-206ENSMUST00000208658 2891 ntBASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.51■□□□□ 0.87
Lonrf1D3YY23 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lonrf1D3YY23 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Gm9870-201ENSMUST00000063874 645 ntBASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Lonrf1D3YY23 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lonrf1D3YY23 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.48■□□□□ 0.87
Lonrf1D3YY23 Mir6236-201ENSMUST00000184437 123 ntBASIC20.48■□□□□ 0.87
Lonrf1D3YY23 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Gm43530-201ENSMUST00000195920 274 ntBASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lonrf1D3YY23 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Gm5812-201ENSMUST00000061073 957 ntBASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lonrf1D3YY23 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lonrf1D3YY23 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lonrf1D3YY23 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Gm7417-201ENSMUST00000192950 473 ntBASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lonrf1D3YY23 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms