Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igkv5-39A0A0G2JDV4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.08■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm10493-201ENSMUST00000097270 612 ntBASIC20.05■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-39A0A0G2JDV4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.05■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.05■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-39A0A0G2JDV4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.99■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv5-39A0A0G2JDV4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.99■□□□□ 0.79
Igkv5-39A0A0G2JDV4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms