Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 FP325331.1-202ENST00000623531 1380 ntBASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CSNK1G3Q9Y6M4 AC093323.1-202ENST00000635031 2045 ntBASIC21.94■■□□□ 1.1
CSNK1G3Q9Y6M4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CSNK1G3Q9Y6M4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.94■■□□□ 1.1
CSNK1G3Q9Y6M4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSNK1G3Q9Y6M4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 AL162430.1-201ENST00000480705 870 ntBASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 AL499627.2-201ENST00000606283 725 ntBASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CSNK1G3Q9Y6M4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CSNK1G3Q9Y6M4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSNK1G3Q9Y6M4 AC133637.1-201ENST00000624115 1537 ntBASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 TSPY26P-201ENST00000476365 1326 ntBASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSNK1G3Q9Y6M4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSNK1G3Q9Y6M4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 DUX4L4-201ENST00000566884 1269 ntBASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.89■■□□□ 1.09
CSNK1G3Q9Y6M4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 AC142381.3-201ENST00000568208 1670 ntBASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 IGHV3-19-201ENST00000521488 291 ntBASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 AL358852.1-201ENST00000623174 1268 ntBASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.88■■□□□ 1.09
CSNK1G3Q9Y6M4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSNK1G3Q9Y6M4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 AC034268.1-201ENST00000441047 882 ntBASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 YBX1P1-201ENST00000445822 960 ntBASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CSNK1G3Q9Y6M4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 MIR572-201ENST00000384983 95 ntBASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms