Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC25.15■■□□□ 1.62
RNF216Q9NWF9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
RNF216Q9NWF9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF216Q9NWF9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF216Q9NWF9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RNF216Q9NWF9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF216Q9NWF9 AL136162.1-201ENST00000607711 1078 ntBASIC25.14■■□□□ 1.62
RNF216Q9NWF9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF216Q9NWF9 AC135279.3-201ENST00000610945 1311 ntBASIC25.13■■□□□ 1.61
RNF216Q9NWF9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 EDA-201ENST00000338901 1233 ntBASIC25.13■■□□□ 1.61
RNF216Q9NWF9 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 AL132657.2-201ENST00000564417 358 ntBASIC25.13■■□□□ 1.61
RNF216Q9NWF9 AC048344.4-201ENST00000619744 527 ntBASIC25.13■■□□□ 1.61
RNF216Q9NWF9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF216Q9NWF9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF216Q9NWF9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 AC104629.1-201ENST00000494226 508 ntBASIC25.11■■□□□ 1.61
RNF216Q9NWF9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 AC022148.2-201ENST00000586176 560 ntBASIC25.11■■□□□ 1.61
RNF216Q9NWF9 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF216Q9NWF9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 AC010740.1-201ENST00000417035 684 ntBASIC25.1■■□□□ 1.61
RNF216Q9NWF9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF216Q9NWF9 AC068473.5-201ENST00000616428 2072 ntBASIC25.09■■□□□ 1.61
RNF216Q9NWF9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 AL355001.2-201ENST00000620617 1191 ntBASIC25.09■■□□□ 1.61
RNF216Q9NWF9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF216Q9NWF9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 EIF2S2P3-201ENST00000428356 999 ntBASIC25.08■■□□□ 1.61
RNF216Q9NWF9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RNF216Q9NWF9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RNF216Q9NWF9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RNF216Q9NWF9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.07■■□□□ 1.6
RNF216Q9NWF9 AL035696.2-201ENST00000407941 709 ntBASIC25.07■■□□□ 1.6
RNF216Q9NWF9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF216Q9NWF9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF216Q9NWF9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RNF216Q9NWF9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms