Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 AC004448.1-201ENST00000458332 883 ntBASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRCC1Q9NPI7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 AF131216.4-201ENST00000638924 1588 ntBASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRCC1Q9NPI7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 GUSBP5-202ENST00000510805 1989 ntBASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRCC1Q9NPI7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 AC079630.1-202ENST00000618127 1840 ntBASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRCC1Q9NPI7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KRCC1Q9NPI7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 AC004987.1-201ENST00000428627 508 ntBASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRCC1Q9NPI7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRCC1Q9NPI7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 AC127496.7-201ENST00000625110 1798 ntBASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 TSPY13P-201ENST00000338964 914 ntBASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms