Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 pRNA.6-201ENST00000610482 90 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 pRNA.5-201ENST00000612139 90 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 AC005837.3-201ENST00000612163 286 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 pRNA.11-201ENST00000618423 90 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 pRNA.13-201ENST00000619112 90 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 AC136469.2-201ENST00000623944 1028 ntBASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CSNK1G1Q9HCP0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CSNK1G1Q9HCP0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.58■■□□□ 1.36
CSNK1G1Q9HCP0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 EDA-201ENST00000338901 1233 ntBASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G1Q9HCP0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 MIR4767-201ENST00000582827 78 ntBASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G1Q9HCP0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G1Q9HCP0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 SUDS3P1-201ENST00000505831 966 ntBASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 AL355001.2-201ENST00000620617 1191 ntBASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G1Q9HCP0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G1Q9HCP0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 AC092068.2-201ENST00000590491 1708 ntBASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 ANOS2P-203ENST00000472227 1816 ntBASIC23.52■■□□□ 1.36
CSNK1G1Q9HCP0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 AL353803.4-201ENST00000565882 1934 ntBASIC23.51■■□□□ 1.35
CSNK1G1Q9HCP0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 AC133637.1-201ENST00000624115 1537 ntBASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 AC019069.1-201ENST00000610008 1333 ntBASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G1Q9HCP0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms