Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Nkx2-4Q9EQM3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-4Q9EQM3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-4Q9EQM3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-4Q9EQM3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-4Q9EQM3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-4Q9EQM3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-4Q9EQM3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-4Q9EQM3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx2-4Q9EQM3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx2-4Q9EQM3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-4Q9EQM3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-4Q9EQM3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-4Q9EQM3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.75■□□□□ 0.91
Nkx2-4Q9EQM3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-4Q9EQM3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.74■□□□□ 0.91
Nkx2-4Q9EQM3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-4Q9EQM3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-4Q9EQM3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-4Q9EQM3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.72■□□□□ 0.91
Nkx2-4Q9EQM3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-4Q9EQM3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-4Q9EQM3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-4Q9EQM3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-4Q9EQM3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-4Q9EQM3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-4Q9EQM3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nkx2-4Q9EQM3 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.69■□□□□ 0.9
Nkx2-4Q9EQM3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-4Q9EQM3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-4Q9EQM3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nkx2-4Q9EQM3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-4Q9EQM3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-4Q9EQM3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-4Q9EQM3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gm13168-201ENSMUST00000121771 632 ntBASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gm5408-201ENSMUST00000197998 747 ntBASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.67■□□□□ 0.9
Nkx2-4Q9EQM3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-4Q9EQM3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkx2-4Q9EQM3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms