Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf138Q9CQE0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 Gm18284-201ENSMUST00000172604 624 ntBASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf138Q9CQE0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf138Q9CQE0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf138Q9CQE0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf138Q9CQE0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Gm8495-201ENSMUST00000188740 694 ntBASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf138Q9CQE0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf138Q9CQE0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf138Q9CQE0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf138Q9CQE0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.83■□□□□ 0.61
Rnf138Q9CQE0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Rnf138Q9CQE0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf138Q9CQE0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.83■□□□□ 0.6
Rnf138Q9CQE0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms