Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Raf1Q99N57 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.84■□□□□ 0.45
Raf1Q99N57 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.84■□□□□ 0.45
Raf1Q99N57 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Raf1Q99N57 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Raf1Q99N57 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Raf1Q99N57 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Raf1Q99N57 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.84■□□□□ 0.45
Raf1Q99N57 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Raf1Q99N57 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Raf1Q99N57 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raf1Q99N57 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Raf1Q99N57 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raf1Q99N57 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raf1Q99N57 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raf1Q99N57 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raf1Q99N57 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raf1Q99N57 Gm7417-201ENSMUST00000192950 473 ntBASIC17.83■□□□□ 0.44
Raf1Q99N57 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raf1Q99N57 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raf1Q99N57 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raf1Q99N57 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
Raf1Q99N57 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Raf1Q99N57 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Raf1Q99N57 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raf1Q99N57 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raf1Q99N57 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Raf1Q99N57 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Raf1Q99N57 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raf1Q99N57 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.81■□□□□ 0.44
Raf1Q99N57 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Raf1Q99N57 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raf1Q99N57 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raf1Q99N57 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Raf1Q99N57 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Raf1Q99N57 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.8■□□□□ 0.44
Raf1Q99N57 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Raf1Q99N57 Gm13241-201ENSMUST00000094493 780 ntBASIC17.8■□□□□ 0.44
Raf1Q99N57 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raf1Q99N57 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.79■□□□□ 0.44
Raf1Q99N57 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.79■□□□□ 0.44
Raf1Q99N57 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.79■□□□□ 0.44
Raf1Q99N57 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Raf1Q99N57 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raf1Q99N57 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.78■□□□□ 0.44
Raf1Q99N57 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.78■□□□□ 0.44
Raf1Q99N57 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.78■□□□□ 0.44
Raf1Q99N57 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Raf1Q99N57 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Raf1Q99N57 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raf1Q99N57 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raf1Q99N57 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raf1Q99N57 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms