Protein–RNA interactions for Protein: Q99J21

Mcoln1, Mucolipin-1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln1Q99J21 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mcoln1Q99J21 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mcoln1Q99J21 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mcoln1Q99J21 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.33■■□□□ 1
Mcoln1Q99J21 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mcoln1Q99J21 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mcoln1Q99J21 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mcoln1Q99J21 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Mcoln1Q99J21 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.32■■□□□ 1
Mcoln1Q99J21 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mcoln1Q99J21 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.32■■□□□ 1
Mcoln1Q99J21 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mcoln1Q99J21 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.31■■□□□ 1
Mcoln1Q99J21 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Mcoln1Q99J21 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Gm13148-201ENSMUST00000118892 745 ntBASIC21.31■■□□□ 1
Mcoln1Q99J21 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Gm10812-201ENSMUST00000099864 546 ntBASIC21.31■■□□□ 1
Mcoln1Q99J21 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mcoln1Q99J21 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mcoln1Q99J21 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.29■■□□□ 1
Mcoln1Q99J21 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.29■■□□□ 1
Mcoln1Q99J21 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.29■■□□□ 1
Mcoln1Q99J21 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.29■■□□□ 1
Mcoln1Q99J21 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.29■■□□□ 1
Mcoln1Q99J21 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Mcoln1Q99J21 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.28■■□□□ 1
Mcoln1Q99J21 Gm20049-201ENSMUST00000219950 730 ntBASIC21.28■■□□□ 1
Mcoln1Q99J21 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.28■■□□□ 1
Mcoln1Q99J21 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mcoln1Q99J21 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Mcoln1Q99J21 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.27■■□□□ 1
Mcoln1Q99J21 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Mcoln1Q99J21 Gm5408-201ENSMUST00000197998 747 ntBASIC21.27■■□□□ 1
Mcoln1Q99J21 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mcoln1Q99J21 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.27■■□□□ 1
Mcoln1Q99J21 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mcoln1Q99J21 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mcoln1Q99J21 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Mcoln1Q99J21 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mcoln1Q99J21 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mcoln1Q99J21 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mcoln1Q99J21 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mcoln1Q99J21 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mcoln1Q99J21 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mcoln1Q99J21 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mcoln1Q99J21 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mcoln1Q99J21 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mcoln1Q99J21 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.22■□□□□ 0.99
Mcoln1Q99J21 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mcoln1Q99J21 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms