Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.68■□□□□ 0.9
Trim60Q8VI40 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim60Q8VI40 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim60Q8VI40 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Gm40881-201ENSMUST00000223397 166 ntBASIC20.66■□□□□ 0.9
Trim60Q8VI40 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim60Q8VI40 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim60Q8VI40 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.65■□□□□ 0.9
Trim60Q8VI40 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim60Q8VI40 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim60Q8VI40 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim60Q8VI40 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim60Q8VI40 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim60Q8VI40 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim60Q8VI40 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim60Q8VI40 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim60Q8VI40 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim60Q8VI40 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim60Q8VI40 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.6■□□□□ 0.89
Trim60Q8VI40 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim60Q8VI40 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 532 ms