Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q8VDP2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8VDP2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8VDP2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.43■□□□□ 0.7
Q8VDP2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.43■□□□□ 0.7
Q8VDP2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.43■□□□□ 0.7
Q8VDP2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8VDP2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Q8VDP2 Fst-202ENSMUST00000223640 2612 ntBASIC19.42■□□□□ 0.7
Q8VDP2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8VDP2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Q8VDP2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Q8VDP2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.42■□□□□ 0.7
Q8VDP2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q8VDP2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Q8VDP2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Q8VDP2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.41■□□□□ 0.7
Q8VDP2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8VDP2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Q8VDP2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Q8VDP2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.4■□□□□ 0.7
Q8VDP2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.4■□□□□ 0.7
Q8VDP2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8VDP2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Q8VDP2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Q8VDP2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Q8VDP2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Q8VDP2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8VDP2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8VDP2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8VDP2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8VDP2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Q8VDP2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Q8VDP2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.38■□□□□ 0.69
Q8VDP2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8VDP2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Q8VDP2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8VDP2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Q8VDP2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Q8VDP2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.36■□□□□ 0.69
Q8VDP2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.36■□□□□ 0.69
Q8VDP2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Q8VDP2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8VDP2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.36■□□□□ 0.69
Q8VDP2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Q8VDP2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Q8VDP2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Q8VDP2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.35■□□□□ 0.69
Q8VDP2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Q8VDP2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Q8VDP2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8VDP2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms