Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CipcQ8R0W1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CipcQ8R0W1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.83■□□□□ 0.6
CipcQ8R0W1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CipcQ8R0W1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.82■□□□□ 0.6
CipcQ8R0W1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Gm43530-201ENSMUST00000195920 274 ntBASIC18.82■□□□□ 0.6
CipcQ8R0W1 Gm43137-201ENSMUST00000198052 594 ntBASIC18.82■□□□□ 0.6
CipcQ8R0W1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CipcQ8R0W1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CipcQ8R0W1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CipcQ8R0W1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CipcQ8R0W1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.81■□□□□ 0.6
CipcQ8R0W1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CipcQ8R0W1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CipcQ8R0W1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CipcQ8R0W1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.8■□□□□ 0.6
CipcQ8R0W1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.8■□□□□ 0.6
CipcQ8R0W1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.8■□□□□ 0.6
CipcQ8R0W1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CipcQ8R0W1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CipcQ8R0W1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CipcQ8R0W1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CipcQ8R0W1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CipcQ8R0W1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CipcQ8R0W1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CipcQ8R0W1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CipcQ8R0W1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CipcQ8R0W1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CipcQ8R0W1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms