Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Abca8bQ8K440 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Abca8bQ8K440 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Abca8bQ8K440 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Abca8bQ8K440 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Abca8bQ8K440 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC30.31■■■□□ 2.44
Abca8bQ8K440 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
Abca8bQ8K440 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Abca8bQ8K440 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Abca8bQ8K440 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Abca8bQ8K440 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Abca8bQ8K440 CT030146.1-201ENSMUST00000220919 217 ntBASIC30.29■■■□□ 2.44
Abca8bQ8K440 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Gm10571-201ENSMUST00000097869 1638 ntBASIC30.29■■■□□ 2.44
Abca8bQ8K440 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Gm13146-201ENSMUST00000118508 780 ntBASIC30.29■■■□□ 2.44
Abca8bQ8K440 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC30.29■■■□□ 2.44
Abca8bQ8K440 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abca8bQ8K440 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Abca8bQ8K440 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Abca8bQ8K440 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC30.27■■■□□ 2.44
Abca8bQ8K440 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC30.27■■■□□ 2.44
Abca8bQ8K440 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Abca8bQ8K440 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
Abca8bQ8K440 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Abca8bQ8K440 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC30.26■■■□□ 2.44
Abca8bQ8K440 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Abca8bQ8K440 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC30.25■■■□□ 2.43
Abca8bQ8K440 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Abca8bQ8K440 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Abca8bQ8K440 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Abca8bQ8K440 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Abca8bQ8K440 CT010467.1-202ENSMUST00000205406 714 ntBASIC30.24■■■□□ 2.43
Abca8bQ8K440 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Abca8bQ8K440 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Abca8bQ8K440 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Abca8bQ8K440 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Abca8bQ8K440 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Abca8bQ8K440 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Abca8bQ8K440 Gm43403-201ENSMUST00000198011 1786 ntBASIC30.23■■■□□ 2.43
Abca8bQ8K440 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Abca8bQ8K440 Gm22240-201ENSMUST00000175225 82 ntBASIC30.22■■■□□ 2.43
Abca8bQ8K440 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Abca8bQ8K440 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Abca8bQ8K440 Gm5913-201ENSMUST00000119397 1399 ntBASIC30.22■■■□□ 2.43
Abca8bQ8K440 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Abca8bQ8K440 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Abca8bQ8K440 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Abca8bQ8K440 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Abca8bQ8K440 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Abca8bQ8K440 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Abca8bQ8K440 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Abca8bQ8K440 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Abca8bQ8K440 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Abca8bQ8K440 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Abca8bQ8K440 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Abca8bQ8K440 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abca8bQ8K440 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Abca8bQ8K440 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Abca8bQ8K440 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms