Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
TMEFF1Q8IYR6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMEFF1Q8IYR6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMEFF1Q8IYR6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 CCDC92B-201ENST00000575506 885 ntBASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEFF1Q8IYR6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 AC133637.1-201ENST00000624115 1537 ntBASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 AL354811.1-201ENST00000610286 706 ntBASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.38■■□□□ 1.17
TMEFF1Q8IYR6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEFF1Q8IYR6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 NTF6G-201ENST00000591094 616 ntBASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEFF1Q8IYR6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEFF1Q8IYR6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 KRT18P14-201ENST00000534205 1250 ntBASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 AC010525.1-201ENST00000585559 441 ntBASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEFF1Q8IYR6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEFF1Q8IYR6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.33■■□□□ 1.16
TMEFF1Q8IYR6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
TMEFF1Q8IYR6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
TMEFF1Q8IYR6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
TMEFF1Q8IYR6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 AC020928.2-201ENST00000588717 2197 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms