Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Alx1Q8C8B0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Alx1Q8C8B0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.56■■□□□ 1.36
Alx1Q8C8B0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.56■■□□□ 1.36
Alx1Q8C8B0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Alx1Q8C8B0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Alx1Q8C8B0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Gm43173-201ENSMUST00000202246 593 ntBASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.53■■□□□ 1.36
Alx1Q8C8B0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alx1Q8C8B0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Alx1Q8C8B0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Alx1Q8C8B0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Gm8493-201ENSMUST00000196881 489 ntBASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Alx1Q8C8B0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Alx1Q8C8B0 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alx1Q8C8B0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Alx1Q8C8B0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms