Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf3Q8C120 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf3Q8C120 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.84■□□□□ 0.93
Sh3rf3Q8C120 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf3Q8C120 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3rf3Q8C120 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3rf3Q8C120 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Gm43530-201ENSMUST00000195920 274 ntBASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf3Q8C120 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sh3rf3Q8C120 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf3Q8C120 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf3Q8C120 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sh3rf3Q8C120 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms