Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.15■■□□□ 1.3
VmacQ8BP01 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.15■■□□□ 1.3
VmacQ8BP01 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VmacQ8BP01 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VmacQ8BP01 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.14■■□□□ 1.29
VmacQ8BP01 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VmacQ8BP01 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.14■■□□□ 1.29
VmacQ8BP01 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
VmacQ8BP01 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.29
VmacQ8BP01 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VmacQ8BP01 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VmacQ8BP01 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.13■■□□□ 1.29
VmacQ8BP01 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
VmacQ8BP01 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
VmacQ8BP01 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
VmacQ8BP01 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VmacQ8BP01 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VmacQ8BP01 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
VmacQ8BP01 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VmacQ8BP01 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.13■■□□□ 1.29
VmacQ8BP01 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VmacQ8BP01 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
VmacQ8BP01 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.12■■□□□ 1.29
VmacQ8BP01 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VmacQ8BP01 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.12■■□□□ 1.29
VmacQ8BP01 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.12■■□□□ 1.29
VmacQ8BP01 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.11■■□□□ 1.29
VmacQ8BP01 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VmacQ8BP01 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VmacQ8BP01 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VmacQ8BP01 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.11■■□□□ 1.29
VmacQ8BP01 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.11■■□□□ 1.29
VmacQ8BP01 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.11■■□□□ 1.29
VmacQ8BP01 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
VmacQ8BP01 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VmacQ8BP01 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.11■■□□□ 1.29
VmacQ8BP01 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
VmacQ8BP01 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VmacQ8BP01 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
VmacQ8BP01 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.1■■□□□ 1.29
VmacQ8BP01 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
VmacQ8BP01 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VmacQ8BP01 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VmacQ8BP01 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VmacQ8BP01 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VmacQ8BP01 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VmacQ8BP01 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.08■■□□□ 1.29
VmacQ8BP01 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VmacQ8BP01 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
VmacQ8BP01 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VmacQ8BP01 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
VmacQ8BP01 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.07■■□□□ 1.28
VmacQ8BP01 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.07■■□□□ 1.28
VmacQ8BP01 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.07■■□□□ 1.28
VmacQ8BP01 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.07■■□□□ 1.28
VmacQ8BP01 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VmacQ8BP01 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
VmacQ8BP01 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.06■■□□□ 1.28
VmacQ8BP01 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.06■■□□□ 1.28
VmacQ8BP01 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
VmacQ8BP01 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
VmacQ8BP01 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
VmacQ8BP01 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VmacQ8BP01 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
VmacQ8BP01 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VmacQ8BP01 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VmacQ8BP01 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VmacQ8BP01 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VmacQ8BP01 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VmacQ8BP01 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VmacQ8BP01 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms