Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trpa1Q8BLA8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trpa1Q8BLA8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trpa1Q8BLA8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trpa1Q8BLA8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trpa1Q8BLA8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trpa1Q8BLA8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trpa1Q8BLA8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trpa1Q8BLA8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.91■□□□□ 0.94
Trpa1Q8BLA8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trpa1Q8BLA8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.91■□□□□ 0.94
Trpa1Q8BLA8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.9■□□□□ 0.94
Trpa1Q8BLA8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpa1Q8BLA8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpa1Q8BLA8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpa1Q8BLA8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpa1Q8BLA8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpa1Q8BLA8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpa1Q8BLA8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trpa1Q8BLA8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms