Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.65
Rpap1Q80TE0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC31.57■■■□□ 2.64
Rpap1Q80TE0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rpap1Q80TE0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rpap1Q80TE0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC31.56■■■□□ 2.64
Rpap1Q80TE0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rpap1Q80TE0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Rpap1Q80TE0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rpap1Q80TE0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rpap1Q80TE0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC31.54■■■□□ 2.64
Rpap1Q80TE0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rpap1Q80TE0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Gm10653-202ENSMUST00000139570 835 ntBASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Nespas-201ENSMUST00000143738 1083 ntBASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpap1Q80TE0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rpap1Q80TE0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rpap1Q80TE0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC31.51■■■□□ 2.63
Rpap1Q80TE0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rpap1Q80TE0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rpap1Q80TE0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Gm27801-201ENSMUST00000184174 223 ntBASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rpap1Q80TE0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Rpap1Q80TE0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rpap1Q80TE0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rpap1Q80TE0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rpap1Q80TE0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Gm12441-201ENSMUST00000121806 588 ntBASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rpap1Q80TE0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Rpap1Q80TE0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rpap1Q80TE0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Rpap1Q80TE0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC31.45■■■□□ 2.63
Rpap1Q80TE0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rpap1Q80TE0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rpap1Q80TE0 Gm7514-201ENSMUST00000209475 934 ntBASIC31.43■■■□□ 2.62
Rpap1Q80TE0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC31.42■■■□□ 2.62
Rpap1Q80TE0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rpap1Q80TE0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rpap1Q80TE0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms