Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim17Q7TPM3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim17Q7TPM3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim17Q7TPM3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim17Q7TPM3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim17Q7TPM3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim17Q7TPM3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim17Q7TPM3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 AV356131-201ENSMUST00000206201 750 ntBASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim17Q7TPM3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim17Q7TPM3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim17Q7TPM3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim17Q7TPM3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Gm42778-201ENSMUST00000199644 553 ntBASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim17Q7TPM3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim17Q7TPM3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Trim17Q7TPM3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim17Q7TPM3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim17Q7TPM3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim17Q7TPM3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim17Q7TPM3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim17Q7TPM3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim17Q7TPM3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim17Q7TPM3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms