Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Znf235Q61116 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Znf235Q61116 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Znf235Q61116 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.2■□□□□ 0.98
Znf235Q61116 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Znf235Q61116 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Znf235Q61116 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Znf235Q61116 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Znf235Q61116 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Znf235Q61116 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.19■□□□□ 0.98
Znf235Q61116 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Znf235Q61116 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.17■□□□□ 0.98
Znf235Q61116 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.17■□□□□ 0.98
Znf235Q61116 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.17■□□□□ 0.98
Znf235Q61116 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Znf235Q61116 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Znf235Q61116 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.16■□□□□ 0.98
Znf235Q61116 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Znf235Q61116 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Znf235Q61116 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Znf235Q61116 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Znf235Q61116 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.16■□□□□ 0.98
Znf235Q61116 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Znf235Q61116 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.15■□□□□ 0.98
Znf235Q61116 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.15■□□□□ 0.98
Znf235Q61116 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Znf235Q61116 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Znf235Q61116 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.15■□□□□ 0.98
Znf235Q61116 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Znf235Q61116 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Znf235Q61116 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Znf235Q61116 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Znf235Q61116 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.14■□□□□ 0.97
Znf235Q61116 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Znf235Q61116 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Znf235Q61116 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Znf235Q61116 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Znf235Q61116 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Znf235Q61116 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.13■□□□□ 0.97
Znf235Q61116 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Znf235Q61116 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.13■□□□□ 0.97
Znf235Q61116 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Znf235Q61116 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
Znf235Q61116 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Znf235Q61116 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Znf235Q61116 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Znf235Q61116 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Znf235Q61116 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.12■□□□□ 0.97
Znf235Q61116 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Znf235Q61116 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Znf235Q61116 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Znf235Q61116 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Znf235Q61116 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Znf235Q61116 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Znf235Q61116 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Znf235Q61116 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Znf235Q61116 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Znf235Q61116 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.1■□□□□ 0.97
Znf235Q61116 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.1■□□□□ 0.97
Znf235Q61116 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Znf235Q61116 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.09■□□□□ 0.97
Znf235Q61116 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.09■□□□□ 0.97
Znf235Q61116 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Gm5874-201ENSMUST00000096101 508 ntBASIC21.09■□□□□ 0.97
Znf235Q61116 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms