Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3hdm4Q4VBF2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
R3hdm4Q4VBF2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm4Q4VBF2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.64■■□□□ 1.06
R3hdm4Q4VBF2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
R3hdm4Q4VBF2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3hdm4Q4VBF2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.64■■□□□ 1.05
R3hdm4Q4VBF2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm4Q4VBF2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm4Q4VBF2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm4Q4VBF2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Gm12251-201ENSMUST00000117893 792 ntBASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm4Q4VBF2 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm4Q4VBF2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms