Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.3■□□□□ 0.84
Fam196aQ3USH1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.3■□□□□ 0.84
Fam196aQ3USH1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam196aQ3USH1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam196aQ3USH1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Gm20049-201ENSMUST00000219950 730 ntBASIC20.27■□□□□ 0.84
Fam196aQ3USH1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
Fam196aQ3USH1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Fam196aQ3USH1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Gm13148-201ENSMUST00000118892 745 ntBASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fam196aQ3USH1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam196aQ3USH1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam196aQ3USH1 Gm7290-201ENSMUST00000104990 617 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Gm12918-201ENSMUST00000120234 636 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Gm15710-201ENSMUST00000121821 636 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Fam196aQ3USH1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam196aQ3USH1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
Fam196aQ3USH1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.22■□□□□ 0.83
Fam196aQ3USH1 Gm13836-201ENSMUST00000121159 501 ntBASIC20.22■□□□□ 0.83
Fam196aQ3USH1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam196aQ3USH1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam196aQ3USH1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Fam196aQ3USH1 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.21■□□□□ 0.83
Fam196aQ3USH1 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.21■□□□□ 0.83
Fam196aQ3USH1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam196aQ3USH1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam196aQ3USH1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Fam196aQ3USH1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam196aQ3USH1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms