Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Six5P70178 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six5P70178 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six5P70178 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six5P70178 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six5P70178 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six5P70178 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Six5P70178 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Six5P70178 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six5P70178 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Six5P70178 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six5P70178 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six5P70178 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six5P70178 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Six5P70178 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six5P70178 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.69■□□□□ 0.58
Six5P70178 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six5P70178 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.69■□□□□ 0.58
Six5P70178 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six5P70178 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.69■□□□□ 0.58
Six5P70178 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six5P70178 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six5P70178 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six5P70178 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six5P70178 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.67■□□□□ 0.58
Six5P70178 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Gm13241-201ENSMUST00000094493 780 ntBASIC18.67■□□□□ 0.58
Six5P70178 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six5P70178 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.67■□□□□ 0.58
Six5P70178 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Six5P70178 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six5P70178 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six5P70178 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six5P70178 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Six5P70178 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.65■□□□□ 0.58
Six5P70178 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six5P70178 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Six5P70178 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Six5P70178 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six5P70178 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Six5P70178 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.64■□□□□ 0.57
Six5P70178 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.64■□□□□ 0.57
Six5P70178 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six5P70178 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.63■□□□□ 0.57
Six5P70178 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.63■□□□□ 0.57
Six5P70178 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six5P70178 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Six5P70178 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.62■□□□□ 0.57
Six5P70178 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Six5P70178 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.62■□□□□ 0.57
Six5P70178 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six5P70178 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Six5P70178 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.61■□□□□ 0.57
Six5P70178 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Six5P70178 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Six5P70178 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Six5P70178 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.61■□□□□ 0.57
Six5P70178 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.61■□□□□ 0.57
Six5P70178 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms