Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccr8P56484 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccr8P56484 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccr8P56484 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccr8P56484 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccr8P56484 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccr8P56484 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccr8P56484 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccr8P56484 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccr8P56484 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccr8P56484 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccr8P56484 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.17■□□□□ 0.34
Ccr8P56484 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccr8P56484 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccr8P56484 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccr8P56484 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccr8P56484 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccr8P56484 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ccr8P56484 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccr8P56484 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccr8P56484 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccr8P56484 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccr8P56484 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.15■□□□□ 0.34
Ccr8P56484 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccr8P56484 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccr8P56484 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccr8P56484 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccr8P56484 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccr8P56484 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccr8P56484 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccr8P56484 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccr8P56484 Gm12922-201ENSMUST00000120626 809 ntBASIC17.14■□□□□ 0.33
Ccr8P56484 Mir6236-201ENSMUST00000184437 123 ntBASIC17.14■□□□□ 0.33
Ccr8P56484 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.14■□□□□ 0.33
Ccr8P56484 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccr8P56484 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccr8P56484 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccr8P56484 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccr8P56484 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccr8P56484 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccr8P56484 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccr8P56484 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccr8P56484 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccr8P56484 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ccr8P56484 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccr8P56484 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.12■□□□□ 0.33
Ccr8P56484 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccr8P56484 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr8P56484 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccr8P56484 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr8P56484 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr8P56484 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccr8P56484 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.11■□□□□ 0.33
Ccr8P56484 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr8P56484 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr8P56484 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccr8P56484 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccr8P56484 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ccr8P56484 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr8P56484 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms