Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL15A1P39059 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.73■■■□□ 2.19
COL15A1P39059 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL15A1P39059 AC012414.1-201ENST00000556676 535 ntBASIC28.73■■■□□ 2.19
COL15A1P39059 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.73■■■□□ 2.19
COL15A1P39059 AL137784.2-201ENST00000607332 1000 ntBASIC28.73■■■□□ 2.19
COL15A1P39059 MIR6084-201ENST00000622012 110 ntBASIC28.73■■■□□ 2.19
COL15A1P39059 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.72■■■□□ 2.19
COL15A1P39059 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL15A1P39059 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COL15A1P39059 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.71■■■□□ 2.19
COL15A1P39059 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL15A1P39059 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.71■■■□□ 2.19
COL15A1P39059 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL15A1P39059 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL15A1P39059 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.7■■■□□ 2.19
COL15A1P39059 MIR572-201ENST00000384983 95 ntBASIC28.7■■■□□ 2.18
COL15A1P39059 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL15A1P39059 AC123595.1-201ENST00000440769 1046 ntBASIC28.7■■■□□ 2.18
COL15A1P39059 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.7■■■□□ 2.18
COL15A1P39059 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL15A1P39059 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.69■■■□□ 2.18
COL15A1P39059 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
COL15A1P39059 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL15A1P39059 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
COL15A1P39059 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
COL15A1P39059 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
COL15A1P39059 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL15A1P39059 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
COL15A1P39059 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.69■■■□□ 2.18
COL15A1P39059 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL15A1P39059 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.69■■■□□ 2.18
COL15A1P39059 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
COL15A1P39059 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.69■■■□□ 2.18
COL15A1P39059 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
COL15A1P39059 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL15A1P39059 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.68■■■□□ 2.18
COL15A1P39059 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.68■■■□□ 2.18
COL15A1P39059 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.68■■■□□ 2.18
COL15A1P39059 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
COL15A1P39059 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
COL15A1P39059 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL15A1P39059 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.66■■■□□ 2.18
COL15A1P39059 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL15A1P39059 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.66■■■□□ 2.18
COL15A1P39059 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.66■■■□□ 2.18
COL15A1P39059 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL15A1P39059 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.66■■■□□ 2.18
COL15A1P39059 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.66■■■□□ 2.18
COL15A1P39059 AC133637.1-201ENST00000624115 1537 ntBASIC28.65■■■□□ 2.18
COL15A1P39059 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
COL15A1P39059 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.65■■■□□ 2.18
COL15A1P39059 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.65■■■□□ 2.18
COL15A1P39059 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.65■■■□□ 2.18
COL15A1P39059 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.65■■■□□ 2.18
COL15A1P39059 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
COL15A1P39059 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL15A1P39059 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.65■■■□□ 2.18
COL15A1P39059 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
COL15A1P39059 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL15A1P39059 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
COL15A1P39059 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
COL15A1P39059 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.64■■■□□ 2.18
COL15A1P39059 AL354811.1-201ENST00000610286 706 ntBASIC28.64■■■□□ 2.18
COL15A1P39059 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.64■■■□□ 2.18
COL15A1P39059 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL15A1P39059 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.64■■■□□ 2.18
COL15A1P39059 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
COL15A1P39059 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.18
COL15A1P39059 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.64■■■□□ 2.17
COL15A1P39059 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
COL15A1P39059 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
COL15A1P39059 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.63■■■□□ 2.17
COL15A1P39059 CCDC92B-201ENST00000575506 885 ntBASIC28.63■■■□□ 2.17
COL15A1P39059 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.63■■■□□ 2.17
COL15A1P39059 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL15A1P39059 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL15A1P39059 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
COL15A1P39059 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
COL15A1P39059 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL15A1P39059 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.63■■■□□ 2.17
COL15A1P39059 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL15A1P39059 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
COL15A1P39059 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.62■■■□□ 2.17
COL15A1P39059 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL15A1P39059 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.62■■■□□ 2.17
COL15A1P39059 AC010525.1-201ENST00000585559 441 ntBASIC28.62■■■□□ 2.17
COL15A1P39059 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL15A1P39059 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.61■■■□□ 2.17
COL15A1P39059 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
COL15A1P39059 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL15A1P39059 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.61■■■□□ 2.17
COL15A1P39059 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL15A1P39059 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
COL15A1P39059 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms