Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh4P39038 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.11■□□□□ 0.65
Cdh4P39038 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Cdh4P39038 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdh4P39038 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh4P39038 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.1■□□□□ 0.65
Cdh4P39038 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh4P39038 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.1■□□□□ 0.65
Cdh4P39038 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.1■□□□□ 0.65
Cdh4P39038 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh4P39038 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cdh4P39038 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdh4P39038 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh4P39038 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh4P39038 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdh4P39038 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh4P39038 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh4P39038 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh4P39038 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Cdh4P39038 Mir6236-201ENSMUST00000184437 123 ntBASIC19.08■□□□□ 0.64
Cdh4P39038 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh4P39038 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh4P39038 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh4P39038 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh4P39038 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh4P39038 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cdh4P39038 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cdh4P39038 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh4P39038 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cdh4P39038 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.06■□□□□ 0.64
Cdh4P39038 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.06■□□□□ 0.64
Cdh4P39038 Gm27454-201ENSMUST00000185090 204 ntBASIC19.06■□□□□ 0.64
Cdh4P39038 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Cdh4P39038 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh4P39038 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Gm43137-201ENSMUST00000198052 594 ntBASIC19.05■□□□□ 0.64
Cdh4P39038 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.05■□□□□ 0.64
Cdh4P39038 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cdh4P39038 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh4P39038 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdh4P39038 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdh4P39038 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh4P39038 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdh4P39038 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.03■□□□□ 0.64
Cdh4P39038 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdh4P39038 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.03■□□□□ 0.64
Cdh4P39038 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cdh4P39038 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh4P39038 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cdh4P39038 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh4P39038 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh4P39038 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
Cdh4P39038 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.02■□□□□ 0.64
Cdh4P39038 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Cdh4P39038 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh4P39038 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms