Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla4P09793 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ctla4P09793 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ctla4P09793 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.59■□□□□ 0.57
Ctla4P09793 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla4P09793 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ctla4P09793 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Ctla4P09793 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ctla4P09793 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ctla4P09793 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ctla4P09793 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ctla4P09793 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ctla4P09793 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
Ctla4P09793 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.58■□□□□ 0.56
Ctla4P09793 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.58■□□□□ 0.56
Ctla4P09793 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Ctla4P09793 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctla4P09793 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctla4P09793 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctla4P09793 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ctla4P09793 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.57■□□□□ 0.56
Ctla4P09793 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.57■□□□□ 0.56
Ctla4P09793 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctla4P09793 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ctla4P09793 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctla4P09793 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ctla4P09793 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctla4P09793 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ctla4P09793 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.55■□□□□ 0.56
Ctla4P09793 Mir6236-201ENSMUST00000184437 123 ntBASIC18.55■□□□□ 0.56
Ctla4P09793 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ctla4P09793 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ctla4P09793 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ctla4P09793 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ctla4P09793 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctla4P09793 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctla4P09793 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctla4P09793 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ctla4P09793 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Ctla4P09793 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ctla4P09793 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctla4P09793 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Gm6139-201ENSMUST00000079261 882 ntBASIC18.53■□□□□ 0.56
Ctla4P09793 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ctla4P09793 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ctla4P09793 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ctla4P09793 Gm12251-201ENSMUST00000117893 792 ntBASIC18.52■□□□□ 0.56
Ctla4P09793 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ctla4P09793 Gm8493-201ENSMUST00000196881 489 ntBASIC18.52■□□□□ 0.56
Ctla4P09793 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.52■□□□□ 0.56
Ctla4P09793 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctla4P09793 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ctla4P09793 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ctla4P09793 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.51■□□□□ 0.55
Ctla4P09793 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ctla4P09793 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ctla4P09793 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctla4P09793 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ctla4P09793 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctla4P09793 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ctla4P09793 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms