Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTSDP07339 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTSDP07339 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.6■□□□□ 0.57
CTSDP07339 AC092053.2-201ENST00000640557 1818 ntBASIC18.6■□□□□ 0.57
CTSDP07339 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.6■□□□□ 0.57
CTSDP07339 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTSDP07339 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.6■□□□□ 0.57
CTSDP07339 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTSDP07339 AC087393.1-201ENST00000582896 145 ntBASIC18.6■□□□□ 0.57
CTSDP07339 AC018755.3-202ENST00000596210 929 ntBASIC18.6■□□□□ 0.57
CTSDP07339 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 AC079630.1-202ENST00000618127 1840 ntBASIC18.6■□□□□ 0.57
CTSDP07339 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSDP07339 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTSDP07339 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 AC139530.1-201ENST00000575312 1977 ntBASIC18.59■□□□□ 0.57
CTSDP07339 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 C11orf96-202ENST00000528572 1834 ntBASIC18.59■□□□□ 0.57
CTSDP07339 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSDP07339 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.59■□□□□ 0.57
CTSDP07339 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTSDP07339 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTSDP07339 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSDP07339 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
CTSDP07339 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTSDP07339 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTSDP07339 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTSDP07339 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSDP07339 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.58■□□□□ 0.56
CTSDP07339 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTSDP07339 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.57■□□□□ 0.56
CTSDP07339 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSDP07339 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTSDP07339 GPX1-201ENST00000419349 1106 ntBASIC18.57■□□□□ 0.56
CTSDP07339 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.57■□□□□ 0.56
CTSDP07339 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSDP07339 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSDP07339 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.57■□□□□ 0.56
CTSDP07339 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSDP07339 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSDP07339 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSDP07339 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.56■□□□□ 0.56
CTSDP07339 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CTSDP07339 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CTSDP07339 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CTSDP07339 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSDP07339 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSDP07339 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
CTSDP07339 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTSDP07339 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTSDP07339 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTSDP07339 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSDP07339 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 AL024507.2-201ENST00000606070 2574 ntBASIC18.54■□□□□ 0.56
CTSDP07339 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSDP07339 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms