Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Atn1O35126 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atn1O35126 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atn1O35126 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Atn1O35126 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.54■□□□□ 0.72
Atn1O35126 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.54■□□□□ 0.72
Atn1O35126 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.54■□□□□ 0.72
Atn1O35126 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atn1O35126 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Atn1O35126 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Atn1O35126 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atn1O35126 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atn1O35126 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atn1O35126 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atn1O35126 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.53■□□□□ 0.72
Atn1O35126 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Atn1O35126 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atn1O35126 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
Atn1O35126 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Atn1O35126 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atn1O35126 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atn1O35126 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atn1O35126 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atn1O35126 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atn1O35126 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atn1O35126 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.51■□□□□ 0.71
Atn1O35126 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atn1O35126 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atn1O35126 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Atn1O35126 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.5■□□□□ 0.71
Atn1O35126 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atn1O35126 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atn1O35126 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Atn1O35126 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atn1O35126 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atn1O35126 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.49■□□□□ 0.71
Atn1O35126 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atn1O35126 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Atn1O35126 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.49■□□□□ 0.71
Atn1O35126 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atn1O35126 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Atn1O35126 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Atn1O35126 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atn1O35126 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atn1O35126 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Atn1O35126 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atn1O35126 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atn1O35126 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.48■□□□□ 0.71
Atn1O35126 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Atn1O35126 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.48■□□□□ 0.71
Atn1O35126 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.48■□□□□ 0.71
Atn1O35126 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atn1O35126 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atn1O35126 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atn1O35126 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.48■□□□□ 0.71
Atn1O35126 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atn1O35126 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atn1O35126 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atn1O35126 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atn1O35126 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atn1O35126 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Atn1O35126 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atn1O35126 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.46■□□□□ 0.71
Atn1O35126 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Atn1O35126 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.46■□□□□ 0.71
Atn1O35126 Gm7143-201ENSMUST00000222811 859 ntBASIC19.46■□□□□ 0.71
Atn1O35126 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.46■□□□□ 0.71
Atn1O35126 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.46■□□□□ 0.71
Atn1O35126 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atn1O35126 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Atn1O35126 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atn1O35126 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.45■□□□□ 0.7
Atn1O35126 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atn1O35126 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atn1O35126 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atn1O35126 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Atn1O35126 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atn1O35126 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms