Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf1D3YY23 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Lonrf1D3YY23 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lonrf1D3YY23 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lonrf1D3YY23 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Lonrf1D3YY23 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf1D3YY23 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf1D3YY23 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf1D3YY23 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf1D3YY23 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf1D3YY23 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf1D3YY23 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf1D3YY23 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lonrf1D3YY23 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.6■□□□□ 0.89
Lonrf1D3YY23 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lonrf1D3YY23 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lonrf1D3YY23 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lonrf1D3YY23 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lonrf1D3YY23 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lonrf1D3YY23 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lonrf1D3YY23 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lonrf1D3YY23 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.57■□□□□ 0.88
Lonrf1D3YY23 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lonrf1D3YY23 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Gm15820-201ENSMUST00000201566 728 ntBASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.56■□□□□ 0.88
Lonrf1D3YY23 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lonrf1D3YY23 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms