Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA8B8ZZ34 AC099791.2-201ENST00000605725 427 ntBASIC20.32■□□□□ 0.84
SHISA8B8ZZ34 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA8B8ZZ34 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA8B8ZZ34 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA8B8ZZ34 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA8B8ZZ34 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA8B8ZZ34 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 AC144652.1-201ENST00000609974 1624 ntBASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
SHISA8B8ZZ34 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA8B8ZZ34 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHISA8B8ZZ34 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHISA8B8ZZ34 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SHISA8B8ZZ34 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHISA8B8ZZ34 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 AL353803.4-201ENST00000565882 1934 ntBASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA8B8ZZ34 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 AC009086.3-201ENST00000623486 1008 ntBASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA8B8ZZ34 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA8B8ZZ34 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms