Protein–RNA interactions for Protein: A2ALK8

Ptpn3, Tyrosine-protein phosphatase non-receptor type 3, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn3A2ALK8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn3A2ALK8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.3■■□□□ 1
Ptpn3A2ALK8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Spcs1-204ENSMUST00000226782 949 ntBASIC21.3■■□□□ 1
Ptpn3A2ALK8 Gm6139-201ENSMUST00000079261 882 ntBASIC21.3■■□□□ 1
Ptpn3A2ALK8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.3■■□□□ 1
Ptpn3A2ALK8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn3A2ALK8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn3A2ALK8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.27■■□□□ 1
Ptpn3A2ALK8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn3A2ALK8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptpn3A2ALK8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ptpn3A2ALK8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.26■□□□□ 0.99
Ptpn3A2ALK8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptpn3A2ALK8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptpn3A2ALK8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Gm43173-201ENSMUST00000202246 593 ntBASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Ptpn3A2ALK8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Gm8493-201ENSMUST00000196881 489 ntBASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ptpn3A2ALK8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptpn3A2ALK8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptpn3A2ALK8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms