Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv17A0A140T8P8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv17A0A140T8P8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv17A0A140T8P8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv17A0A140T8P8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv17A0A140T8P8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.27■□□□□ 0.03
Trbv17A0A140T8P8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Gm7143-201ENSMUST00000222811 859 ntBASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv17A0A140T8P8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv17A0A140T8P8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Gm9870-201ENSMUST00000063874 645 ntBASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv17A0A140T8P8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv17A0A140T8P8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv17A0A140T8P8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv17A0A140T8P8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trbv17A0A140T8P8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trbv17A0A140T8P8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv17A0A140T8P8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms