Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Iqck-206ENSMUST00000208658 2891 ntBASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms