Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.6■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Serp2-204ENSMUST00000228055 705 ntBASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1bA0A0A6YXN8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Gm12821-201ENSMUST00000120022 600 ntBASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1bA0A0A6YXN8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms