Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.89■□□□□ 0.13
Trav17A0A075B655 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav17A0A075B655 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav17A0A075B655 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav17A0A075B655 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav17A0A075B655 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav17A0A075B655 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.86■□□□□ 0.13
Trav17A0A075B655 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav17A0A075B655 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Gm11175-201ENSMUST00000116172 543 ntBASIC15.85■□□□□ 0.13
Trav17A0A075B655 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav17A0A075B655 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav17A0A075B655 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav17A0A075B655 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.83■□□□□ 0.13
Trav17A0A075B655 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav17A0A075B655 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav17A0A075B655 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trav17A0A075B655 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav17A0A075B655 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.81■□□□□ 0.12
Trav17A0A075B655 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Gm12366-201ENSMUST00000121722 873 ntBASIC15.81■□□□□ 0.12
Trav17A0A075B655 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.81■□□□□ 0.12
Trav17A0A075B655 Gm5786-201ENSMUST00000085368 882 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms