Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.75■□□□□ 0.43
Trav10A0A075B642 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10A0A075B642 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.74■□□□□ 0.43
Trav10A0A075B642 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.74■□□□□ 0.43
Trav10A0A075B642 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav10A0A075B642 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10A0A075B642 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10A0A075B642 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Gm43530-201ENSMUST00000195920 274 ntBASIC17.72■□□□□ 0.43
Trav10A0A075B642 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10A0A075B642 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav10A0A075B642 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10A0A075B642 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav10A0A075B642 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10A0A075B642 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10A0A075B642 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav10A0A075B642 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 474.7 ms