Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CAHM-201ENST00000604200 896 ntBASIC27.44■■□□□ 1.98
CSNK1G3Q9Y6M4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSNK1G3Q9Y6M4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSNK1G3Q9Y6M4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CSNK1G3Q9Y6M4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.42■■□□□ 1.98
CSNK1G3Q9Y6M4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.41■■□□□ 1.98
CSNK1G3Q9Y6M4 AL133380.1-201ENST00000506013 324 ntBASIC27.41■■□□□ 1.98
CSNK1G3Q9Y6M4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSNK1G3Q9Y6M4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSNK1G3Q9Y6M4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSNK1G3Q9Y6M4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSNK1G3Q9Y6M4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSNK1G3Q9Y6M4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSNK1G3Q9Y6M4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.38■■□□□ 1.97
CSNK1G3Q9Y6M4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.36■■□□□ 1.97
CSNK1G3Q9Y6M4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CSNK1G3Q9Y6M4 AL391121.1-201ENST00000607967 1349 ntBASIC27.36■■□□□ 1.97
CSNK1G3Q9Y6M4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.35■■□□□ 1.97
CSNK1G3Q9Y6M4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.34■■□□□ 1.97
CSNK1G3Q9Y6M4 RPS2P35-201ENST00000443417 897 ntBASIC27.33■■□□□ 1.97
CSNK1G3Q9Y6M4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G3Q9Y6M4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CSNK1G3Q9Y6M4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CSNK1G3Q9Y6M4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CSNK1G3Q9Y6M4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CSNK1G3Q9Y6M4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.28■■□□□ 1.96
CSNK1G3Q9Y6M4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.27■■□□□ 1.96
CSNK1G3Q9Y6M4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
CSNK1G3Q9Y6M4 AP006261.1-201ENST00000584783 668 ntBASIC27.24■■□□□ 1.95
CSNK1G3Q9Y6M4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CSNK1G3Q9Y6M4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSNK1G3Q9Y6M4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
CSNK1G3Q9Y6M4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CSNK1G3Q9Y6M4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CSNK1G3Q9Y6M4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CSNK1G3Q9Y6M4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.18■■□□□ 1.94
CSNK1G3Q9Y6M4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.17■■□□□ 1.94
CSNK1G3Q9Y6M4 AL162393.1-201ENST00000437852 946 ntBASIC27.15■■□□□ 1.94
CSNK1G3Q9Y6M4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CSNK1G3Q9Y6M4 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.14■■□□□ 1.94
CSNK1G3Q9Y6M4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSNK1G3Q9Y6M4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.12■■□□□ 1.93
CSNK1G3Q9Y6M4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CSNK1G3Q9Y6M4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.09■■□□□ 1.93
CSNK1G3Q9Y6M4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.09■■□□□ 1.93
CSNK1G3Q9Y6M4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CSNK1G3Q9Y6M4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSNK1G3Q9Y6M4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CSNK1G3Q9Y6M4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSNK1G3Q9Y6M4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CSNK1G3Q9Y6M4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.04■■□□□ 1.92
CSNK1G3Q9Y6M4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.03■■□□□ 1.92
CSNK1G3Q9Y6M4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSNK1G3Q9Y6M4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.02■■□□□ 1.92
CSNK1G3Q9Y6M4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CSNK1G3Q9Y6M4 MIR3665-201ENST00000578708 105 ntBASIC27.02■■□□□ 1.92
CSNK1G3Q9Y6M4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CSNK1G3Q9Y6M4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CSNK1G3Q9Y6M4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSNK1G3Q9Y6M4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27■■□□□ 1.91
CSNK1G3Q9Y6M4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.98■■□□□ 1.91
CSNK1G3Q9Y6M4 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.96■■□□□ 1.91
CSNK1G3Q9Y6M4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.91■■□□□ 1.9
CSNK1G3Q9Y6M4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CSNK1G3Q9Y6M4 MIR762-201ENST00000390236 83 ntBASIC26.91■■□□□ 1.9
CSNK1G3Q9Y6M4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSNK1G3Q9Y6M4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CSNK1G3Q9Y6M4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CSNK1G3Q9Y6M4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSNK1G3Q9Y6M4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.89■■□□□ 1.9
CSNK1G3Q9Y6M4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CSNK1G3Q9Y6M4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSNK1G3Q9Y6M4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CSNK1G3Q9Y6M4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CSNK1G3Q9Y6M4 DUX4L28-201ENST00000623687 678 ntBASIC26.86■■□□□ 1.89
CSNK1G3Q9Y6M4 AC087741.3-201ENST00000624270 1347 ntBASIC26.86■■□□□ 1.89
CSNK1G3Q9Y6M4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CSNK1G3Q9Y6M4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.85■■□□□ 1.89
CSNK1G3Q9Y6M4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CSNK1G3Q9Y6M4 AC005559.1-201ENST00000589661 871 ntBASIC26.84■■□□□ 1.89
CSNK1G3Q9Y6M4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.84■■□□□ 1.89
CSNK1G3Q9Y6M4 WASH5P-204ENST00000632292 975 ntBASIC26.84■■□□□ 1.89
CSNK1G3Q9Y6M4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CSNK1G3Q9Y6M4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CSNK1G3Q9Y6M4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CSNK1G3Q9Y6M4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSNK1G3Q9Y6M4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSNK1G3Q9Y6M4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.8■■□□□ 1.88
CSNK1G3Q9Y6M4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.78■■□□□ 1.88
CSNK1G3Q9Y6M4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CSNK1G3Q9Y6M4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
CSNK1G3Q9Y6M4 AC044849.2-201ENST00000606596 710 ntBASIC26.77■■□□□ 1.88
CSNK1G3Q9Y6M4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.76■■□□□ 1.87
CSNK1G3Q9Y6M4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CSNK1G3Q9Y6M4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms