Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Clcn2Q9R0A1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Clcn2Q9R0A1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Clcn2Q9R0A1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.6■■□□□ 1.85
Clcn2Q9R0A1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Clcn2Q9R0A1 Gm27322-201ENSMUST00000184007 104 ntBASIC26.58■■□□□ 1.85
Clcn2Q9R0A1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.57■■□□□ 1.84
Clcn2Q9R0A1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Clcn2Q9R0A1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.55■■□□□ 1.84
Clcn2Q9R0A1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Clcn2Q9R0A1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Clcn2Q9R0A1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Clcn2Q9R0A1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Clcn2Q9R0A1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Clcn2Q9R0A1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Clcn2Q9R0A1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Clcn2Q9R0A1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Clcn2Q9R0A1 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.47■■□□□ 1.83
Clcn2Q9R0A1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Clcn2Q9R0A1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.44■■□□□ 1.82
Clcn2Q9R0A1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Clcn2Q9R0A1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Clcn2Q9R0A1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Clcn2Q9R0A1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Clcn2Q9R0A1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Clcn2Q9R0A1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Clcn2Q9R0A1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.36■■□□□ 1.81
Clcn2Q9R0A1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Clcn2Q9R0A1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Clcn2Q9R0A1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.33■■□□□ 1.81
Clcn2Q9R0A1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Clcn2Q9R0A1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.28■■□□□ 1.8
Clcn2Q9R0A1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.25■■□□□ 1.79
Clcn2Q9R0A1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Clcn2Q9R0A1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Clcn2Q9R0A1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Clcn2Q9R0A1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Clcn2Q9R0A1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Clcn2Q9R0A1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Clcn2Q9R0A1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Clcn2Q9R0A1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Clcn2Q9R0A1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Clcn2Q9R0A1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.12■■□□□ 1.77
Clcn2Q9R0A1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Clcn2Q9R0A1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Gm24804-201ENSMUST00000174982 85 ntBASIC26.08■■□□□ 1.77
Clcn2Q9R0A1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Clcn2Q9R0A1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Clcn2Q9R0A1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Clcn2Q9R0A1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Clcn2Q9R0A1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Clcn2Q9R0A1 Mipep-204ENSMUST00000225043 1548 ntBASIC26.03■■□□□ 1.76
Clcn2Q9R0A1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Clcn2Q9R0A1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Clcn2Q9R0A1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Clcn2Q9R0A1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Clcn2Q9R0A1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Clcn2Q9R0A1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Clcn2Q9R0A1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.95■■□□□ 1.75
Clcn2Q9R0A1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Clcn2Q9R0A1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.95■■□□□ 1.74
Clcn2Q9R0A1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Clcn2Q9R0A1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Clcn2Q9R0A1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Clcn2Q9R0A1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Clcn2Q9R0A1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Clcn2Q9R0A1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Clcn2Q9R0A1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Clcn2Q9R0A1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms