Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HOXC10Q9NYD6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
HOXC10Q9NYD6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HOXC10Q9NYD6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HOXC10Q9NYD6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.46■■■□□ 2.79
HOXC10Q9NYD6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
HOXC10Q9NYD6 AL391121.1-201ENST00000607967 1349 ntBASIC32.46■■■□□ 2.79
HOXC10Q9NYD6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
HOXC10Q9NYD6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.44■■■□□ 2.78
HOXC10Q9NYD6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
HOXC10Q9NYD6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.43■■■□□ 2.78
HOXC10Q9NYD6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
HOXC10Q9NYD6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
HOXC10Q9NYD6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
HOXC10Q9NYD6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
HOXC10Q9NYD6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HOXC10Q9NYD6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HOXC10Q9NYD6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
HOXC10Q9NYD6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HOXC10Q9NYD6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.35■■■□□ 2.77
HOXC10Q9NYD6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.34■■■□□ 2.77
HOXC10Q9NYD6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
HOXC10Q9NYD6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
HOXC10Q9NYD6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
HOXC10Q9NYD6 AP006261.1-201ENST00000584783 668 ntBASIC32.3■■■□□ 2.76
HOXC10Q9NYD6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
HOXC10Q9NYD6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HOXC10Q9NYD6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
HOXC10Q9NYD6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
HOXC10Q9NYD6 AL162393.1-201ENST00000437852 946 ntBASIC32.24■■■□□ 2.75
HOXC10Q9NYD6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.23■■■□□ 2.75
HOXC10Q9NYD6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
HOXC10Q9NYD6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
HOXC10Q9NYD6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.22■■■□□ 2.75
HOXC10Q9NYD6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.22■■■□□ 2.75
HOXC10Q9NYD6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.21■■■□□ 2.75
HOXC10Q9NYD6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.2■■■□□ 2.75
HOXC10Q9NYD6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
HOXC10Q9NYD6 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.18■■■□□ 2.74
HOXC10Q9NYD6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.17■■■□□ 2.74
HOXC10Q9NYD6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
HOXC10Q9NYD6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
HOXC10Q9NYD6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
HOXC10Q9NYD6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
HOXC10Q9NYD6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
HOXC10Q9NYD6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.14■■■□□ 2.73
HOXC10Q9NYD6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HOXC10Q9NYD6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.12■■■□□ 2.73
HOXC10Q9NYD6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HOXC10Q9NYD6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
HOXC10Q9NYD6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
HOXC10Q9NYD6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.1■■■□□ 2.73
HOXC10Q9NYD6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
HOXC10Q9NYD6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
HOXC10Q9NYD6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
HOXC10Q9NYD6 MIR3665-201ENST00000578708 105 ntBASIC32.07■■■□□ 2.72
HOXC10Q9NYD6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.05■■■□□ 2.72
HOXC10Q9NYD6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.04■■■□□ 2.72
HOXC10Q9NYD6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HOXC10Q9NYD6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.03■■■□□ 2.72
HOXC10Q9NYD6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HOXC10Q9NYD6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
HOXC10Q9NYD6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.99■■■□□ 2.71
HOXC10Q9NYD6 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.99■■■□□ 2.71
HOXC10Q9NYD6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
HOXC10Q9NYD6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.95■■■□□ 2.71
HOXC10Q9NYD6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
HOXC10Q9NYD6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
HOXC10Q9NYD6 MIR762-201ENST00000390236 83 ntBASIC31.94■■■□□ 2.7
HOXC10Q9NYD6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.92■■■□□ 2.7
HOXC10Q9NYD6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HOXC10Q9NYD6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
HOXC10Q9NYD6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.9■■■□□ 2.7
HOXC10Q9NYD6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
HOXC10Q9NYD6 DUX4L28-201ENST00000623687 678 ntBASIC31.88■■■□□ 2.69
HOXC10Q9NYD6 AC087741.3-201ENST00000624270 1347 ntBASIC31.88■■■□□ 2.69
HOXC10Q9NYD6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
HOXC10Q9NYD6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HOXC10Q9NYD6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HOXC10Q9NYD6 AC005559.1-201ENST00000589661 871 ntBASIC31.84■■■□□ 2.69
HOXC10Q9NYD6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
HOXC10Q9NYD6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.81■■■□□ 2.68
HOXC10Q9NYD6 WASH5P-204ENST00000632292 975 ntBASIC31.81■■■□□ 2.68
HOXC10Q9NYD6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.8■■■□□ 2.68
HOXC10Q9NYD6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.8■■■□□ 2.68
HOXC10Q9NYD6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
HOXC10Q9NYD6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
HOXC10Q9NYD6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HOXC10Q9NYD6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.77■■■□□ 2.68
HOXC10Q9NYD6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
HOXC10Q9NYD6 AC044849.2-201ENST00000606596 710 ntBASIC31.75■■■□□ 2.67
HOXC10Q9NYD6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HOXC10Q9NYD6 ABHD17AP4-201ENST00000411545 909 ntBASIC31.73■■■□□ 2.67
HOXC10Q9NYD6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HOXC10Q9NYD6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
HOXC10Q9NYD6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
HOXC10Q9NYD6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
HOXC10Q9NYD6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
HOXC10Q9NYD6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.68■■■□□ 2.66
HOXC10Q9NYD6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms