Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.91■■■□□ 2.86
ZFYVE28Q9HCC9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
ZFYVE28Q9HCC9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
ZFYVE28Q9HCC9 AL133380.1-201ENST00000506013 324 ntBASIC32.85■■■□□ 2.85
ZFYVE28Q9HCC9 MIR7108-201ENST00000614319 87 ntBASIC32.85■■■□□ 2.85
ZFYVE28Q9HCC9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
ZFYVE28Q9HCC9 ABHD17AP4-201ENST00000411545 909 ntBASIC32.84■■■□□ 2.85
ZFYVE28Q9HCC9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
ZFYVE28Q9HCC9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
ZFYVE28Q9HCC9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
ZFYVE28Q9HCC9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.81■■■□□ 2.84
ZFYVE28Q9HCC9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.8■■■□□ 2.84
ZFYVE28Q9HCC9 MIR3665-201ENST00000578708 105 ntBASIC32.8■■■□□ 2.84
ZFYVE28Q9HCC9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.79■■■□□ 2.84
ZFYVE28Q9HCC9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ZFYVE28Q9HCC9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.75■■■□□ 2.83
ZFYVE28Q9HCC9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
ZFYVE28Q9HCC9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.74■■■□□ 2.83
ZFYVE28Q9HCC9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.74■■■□□ 2.83
ZFYVE28Q9HCC9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ZFYVE28Q9HCC9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ZFYVE28Q9HCC9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ZFYVE28Q9HCC9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.69■■■□□ 2.82
ZFYVE28Q9HCC9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.68■■■□□ 2.82
ZFYVE28Q9HCC9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ZFYVE28Q9HCC9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
ZFYVE28Q9HCC9 AC087741.3-201ENST00000624270 1347 ntBASIC32.63■■■□□ 2.81
ZFYVE28Q9HCC9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ZFYVE28Q9HCC9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.61■■■□□ 2.81
ZFYVE28Q9HCC9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ZFYVE28Q9HCC9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ZFYVE28Q9HCC9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ZFYVE28Q9HCC9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.58■■■□□ 2.81
ZFYVE28Q9HCC9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ZFYVE28Q9HCC9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.57■■■□□ 2.8
ZFYVE28Q9HCC9 DUX4L28-201ENST00000623687 678 ntBASIC32.56■■■□□ 2.8
ZFYVE28Q9HCC9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
ZFYVE28Q9HCC9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.54■■■□□ 2.8
ZFYVE28Q9HCC9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 HLA-V-202ENST00000446817 847 ntBASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 AC044849.2-201ENST00000606596 710 ntBASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.53■■■□□ 2.8
ZFYVE28Q9HCC9 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.52■■■□□ 2.8
ZFYVE28Q9HCC9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ZFYVE28Q9HCC9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.47■■■□□ 2.79
ZFYVE28Q9HCC9 MIR762-201ENST00000390236 83 ntBASIC32.45■■■□□ 2.79
ZFYVE28Q9HCC9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
ZFYVE28Q9HCC9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ZFYVE28Q9HCC9 AC005559.1-201ENST00000589661 871 ntBASIC32.41■■■□□ 2.78
ZFYVE28Q9HCC9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ZFYVE28Q9HCC9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.4■■■□□ 2.78
ZFYVE28Q9HCC9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.4■■■□□ 2.78
ZFYVE28Q9HCC9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.4■■■□□ 2.78
ZFYVE28Q9HCC9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
ZFYVE28Q9HCC9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
ZFYVE28Q9HCC9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.38■■■□□ 2.77
ZFYVE28Q9HCC9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZFYVE28Q9HCC9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZFYVE28Q9HCC9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ZFYVE28Q9HCC9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.31■■■□□ 2.76
ZFYVE28Q9HCC9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.3■■■□□ 2.76
ZFYVE28Q9HCC9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.28■■■□□ 2.76
ZFYVE28Q9HCC9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.28■■■□□ 2.76
ZFYVE28Q9HCC9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.28■■■□□ 2.76
ZFYVE28Q9HCC9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
ZFYVE28Q9HCC9 ZNRF2P2-203ENST00000454624 420 ntBASIC32.26■■■□□ 2.75
ZFYVE28Q9HCC9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.24■■■□□ 2.75
ZFYVE28Q9HCC9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
ZFYVE28Q9HCC9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
ZFYVE28Q9HCC9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.23■■■□□ 2.75
ZFYVE28Q9HCC9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
ZFYVE28Q9HCC9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.21■■■□□ 2.75
ZFYVE28Q9HCC9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
ZFYVE28Q9HCC9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.2■■■□□ 2.74
ZFYVE28Q9HCC9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.19■■■□□ 2.74
ZFYVE28Q9HCC9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ZFYVE28Q9HCC9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
ZFYVE28Q9HCC9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
ZFYVE28Q9HCC9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.13■■■□□ 2.73
ZFYVE28Q9HCC9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZFYVE28Q9HCC9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.11■■■□□ 2.73
ZFYVE28Q9HCC9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ZFYVE28Q9HCC9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ZFYVE28Q9HCC9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ZFYVE28Q9HCC9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ZFYVE28Q9HCC9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ZFYVE28Q9HCC9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.07■■■□□ 2.72
ZFYVE28Q9HCC9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ZFYVE28Q9HCC9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.06■■■□□ 2.72
ZFYVE28Q9HCC9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.05■■■□□ 2.72
ZFYVE28Q9HCC9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ZFYVE28Q9HCC9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ZFYVE28Q9HCC9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
ZFYVE28Q9HCC9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.02■■■□□ 2.72
ZFYVE28Q9HCC9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ZFYVE28Q9HCC9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32■■■□□ 2.71
ZFYVE28Q9HCC9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
ZFYVE28Q9HCC9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms