Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDH20Q9HBT6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH20Q9HBT6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH20Q9HBT6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH20Q9HBT6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.11■■□□□ 1.45
CDH20Q9HBT6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH20Q9HBT6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.1■■□□□ 1.45
CDH20Q9HBT6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH20Q9HBT6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.09■■□□□ 1.45
CDH20Q9HBT6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDH20Q9HBT6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH20Q9HBT6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.06■■□□□ 1.44
CDH20Q9HBT6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CDH20Q9HBT6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH20Q9HBT6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH20Q9HBT6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH20Q9HBT6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDH20Q9HBT6 RARRES2P7-201ENST00000567349 469 ntBASIC24.03■■□□□ 1.44
CDH20Q9HBT6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.02■■□□□ 1.44
CDH20Q9HBT6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDH20Q9HBT6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDH20Q9HBT6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.02■■□□□ 1.44
CDH20Q9HBT6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDH20Q9HBT6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24■■□□□ 1.43
CDH20Q9HBT6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CDH20Q9HBT6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH20Q9HBT6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.99■■□□□ 1.43
CDH20Q9HBT6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CDH20Q9HBT6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CDH20Q9HBT6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDH20Q9HBT6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH20Q9HBT6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.96■■□□□ 1.43
CDH20Q9HBT6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.96■■□□□ 1.43
CDH20Q9HBT6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.95■■□□□ 1.42
CDH20Q9HBT6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDH20Q9HBT6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH20Q9HBT6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.94■■□□□ 1.42
CDH20Q9HBT6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH20Q9HBT6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH20Q9HBT6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH20Q9HBT6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.9■■□□□ 1.42
CDH20Q9HBT6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDH20Q9HBT6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDH20Q9HBT6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH20Q9HBT6 SETD8P1-201ENST00000623146 1180 ntBASIC23.87■■□□□ 1.41
CDH20Q9HBT6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH20Q9HBT6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH20Q9HBT6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH20Q9HBT6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH20Q9HBT6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH20Q9HBT6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH20Q9HBT6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH20Q9HBT6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.82■■□□□ 1.4
CDH20Q9HBT6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH20Q9HBT6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CDH20Q9HBT6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH20Q9HBT6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH20Q9HBT6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH20Q9HBT6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH20Q9HBT6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.77■■□□□ 1.4
CDH20Q9HBT6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH20Q9HBT6 AL133380.1-201ENST00000506013 324 ntBASIC23.75■■□□□ 1.39
CDH20Q9HBT6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.75■■□□□ 1.39
CDH20Q9HBT6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDH20Q9HBT6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.74■■□□□ 1.39
CDH20Q9HBT6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH20Q9HBT6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.73■■□□□ 1.39
CDH20Q9HBT6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH20Q9HBT6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH20Q9HBT6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CDH20Q9HBT6 AC097358.2-201ENST00000607541 1159 ntBASIC23.71■■□□□ 1.39
CDH20Q9HBT6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH20Q9HBT6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH20Q9HBT6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDH20Q9HBT6 AC120057.4-201ENST00000624722 1615 ntBASIC23.69■■□□□ 1.38
CDH20Q9HBT6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH20Q9HBT6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH20Q9HBT6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDH20Q9HBT6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CDH20Q9HBT6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDH20Q9HBT6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDH20Q9HBT6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH20Q9HBT6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDH20Q9HBT6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDH20Q9HBT6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.66■■□□□ 1.38
CDH20Q9HBT6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CDH20Q9HBT6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.65■■□□□ 1.38
CDH20Q9HBT6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.65■■□□□ 1.38
CDH20Q9HBT6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH20Q9HBT6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CDH20Q9HBT6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.64■■□□□ 1.37
CDH20Q9HBT6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.63■■□□□ 1.37
CDH20Q9HBT6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.63■■□□□ 1.37
CDH20Q9HBT6 AC136428.2-201ENST00000563187 214 ntBASIC23.62■■□□□ 1.37
CDH20Q9HBT6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH20Q9HBT6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH20Q9HBT6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
CDH20Q9HBT6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH20Q9HBT6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
CDH20Q9HBT6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms