Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYSTM1Q9H1C7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYSTM1Q9H1C7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYSTM1Q9H1C7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYSTM1Q9H1C7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.79■□□□□ 0.28
CYSTM1Q9H1C7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CYSTM1Q9H1C7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.78■□□□□ 0.28
CYSTM1Q9H1C7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CYSTM1Q9H1C7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYSTM1Q9H1C7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYSTM1Q9H1C7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CYSTM1Q9H1C7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYSTM1Q9H1C7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CYSTM1Q9H1C7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYSTM1Q9H1C7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYSTM1Q9H1C7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYSTM1Q9H1C7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYSTM1Q9H1C7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYSTM1Q9H1C7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CYSTM1Q9H1C7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYSTM1Q9H1C7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYSTM1Q9H1C7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYSTM1Q9H1C7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYSTM1Q9H1C7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CYSTM1Q9H1C7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CYSTM1Q9H1C7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CYSTM1Q9H1C7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CYSTM1Q9H1C7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
CYSTM1Q9H1C7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CYSTM1Q9H1C7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYSTM1Q9H1C7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.67■□□□□ 0.26
CYSTM1Q9H1C7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CYSTM1Q9H1C7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CYSTM1Q9H1C7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYSTM1Q9H1C7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYSTM1Q9H1C7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.65■□□□□ 0.26
CYSTM1Q9H1C7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYSTM1Q9H1C7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYSTM1Q9H1C7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CYSTM1Q9H1C7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.63■□□□□ 0.25
CYSTM1Q9H1C7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYSTM1Q9H1C7 AL356512.1-201ENST00000607453 1739 ntBASIC16.63■□□□□ 0.25
CYSTM1Q9H1C7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYSTM1Q9H1C7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYSTM1Q9H1C7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYSTM1Q9H1C7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
CYSTM1Q9H1C7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYSTM1Q9H1C7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYSTM1Q9H1C7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYSTM1Q9H1C7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYSTM1Q9H1C7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYSTM1Q9H1C7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CYSTM1Q9H1C7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CYSTM1Q9H1C7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYSTM1Q9H1C7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CYSTM1Q9H1C7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC16.57■□□□□ 0.24
CYSTM1Q9H1C7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CYSTM1Q9H1C7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC16.56■□□□□ 0.24
CYSTM1Q9H1C7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.56■□□□□ 0.24
CYSTM1Q9H1C7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CYSTM1Q9H1C7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYSTM1Q9H1C7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYSTM1Q9H1C7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYSTM1Q9H1C7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.54■□□□□ 0.24
CYSTM1Q9H1C7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYSTM1Q9H1C7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYSTM1Q9H1C7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYSTM1Q9H1C7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CYSTM1Q9H1C7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.52■□□□□ 0.23
CYSTM1Q9H1C7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CYSTM1Q9H1C7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CYSTM1Q9H1C7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.52■□□□□ 0.23
CYSTM1Q9H1C7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CYSTM1Q9H1C7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.51■□□□□ 0.23
CYSTM1Q9H1C7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.5■□□□□ 0.23
CYSTM1Q9H1C7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYSTM1Q9H1C7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYSTM1Q9H1C7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.49■□□□□ 0.23
CYSTM1Q9H1C7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYSTM1Q9H1C7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.48■□□□□ 0.23
CYSTM1Q9H1C7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CYSTM1Q9H1C7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CYSTM1Q9H1C7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CYSTM1Q9H1C7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CYSTM1Q9H1C7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.46■□□□□ 0.23
CYSTM1Q9H1C7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CYSTM1Q9H1C7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CYSTM1Q9H1C7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CYSTM1Q9H1C7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CYSTM1Q9H1C7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYSTM1Q9H1C7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CYSTM1Q9H1C7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYSTM1Q9H1C7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYSTM1Q9H1C7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYSTM1Q9H1C7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYSTM1Q9H1C7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.4■□□□□ 0.22
CYSTM1Q9H1C7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYSTM1Q9H1C7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.4■□□□□ 0.22
CYSTM1Q9H1C7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYSTM1Q9H1C7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms