Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.68■■■□□ 2.02
Rtn3Q9ES97 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rtn3Q9ES97 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rtn3Q9ES97 Gm24804-201ENSMUST00000174982 85 ntBASIC27.66■■■□□ 2.02
Rtn3Q9ES97 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rtn3Q9ES97 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Rtn3Q9ES97 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Rtn3Q9ES97 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.63■■■□□ 2.01
Rtn3Q9ES97 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.63■■■□□ 2.01
Rtn3Q9ES97 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtn3Q9ES97 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.62■■■□□ 2.01
Rtn3Q9ES97 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.62■■■□□ 2.01
Rtn3Q9ES97 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.58■■■□□ 2.01
Rtn3Q9ES97 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rtn3Q9ES97 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.56■■■□□ 2
Rtn3Q9ES97 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Rtn3Q9ES97 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.54■■■□□ 2
Rtn3Q9ES97 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rtn3Q9ES97 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rtn3Q9ES97 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Rtn3Q9ES97 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Rtn3Q9ES97 Mipep-204ENSMUST00000225043 1548 ntBASIC27.5■■□□□ 1.99
Rtn3Q9ES97 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtn3Q9ES97 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtn3Q9ES97 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtn3Q9ES97 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Rtn3Q9ES97 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rtn3Q9ES97 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rtn3Q9ES97 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rtn3Q9ES97 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rtn3Q9ES97 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rtn3Q9ES97 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rtn3Q9ES97 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rtn3Q9ES97 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rtn3Q9ES97 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Rtn3Q9ES97 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn3Q9ES97 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.3■■□□□ 1.96
Rtn3Q9ES97 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn3Q9ES97 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn3Q9ES97 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rtn3Q9ES97 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Rtn3Q9ES97 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtn3Q9ES97 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtn3Q9ES97 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.25■■□□□ 1.95
Rtn3Q9ES97 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtn3Q9ES97 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rtn3Q9ES97 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn3Q9ES97 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn3Q9ES97 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn3Q9ES97 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn3Q9ES97 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtn3Q9ES97 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rtn3Q9ES97 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.95
Rtn3Q9ES97 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rtn3Q9ES97 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rtn3Q9ES97 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtn3Q9ES97 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Rtn3Q9ES97 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn3Q9ES97 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn3Q9ES97 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn3Q9ES97 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.15■■□□□ 1.94
Rtn3Q9ES97 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Rtn3Q9ES97 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtn3Q9ES97 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rtn3Q9ES97 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn3Q9ES97 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Rtn3Q9ES97 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rtn3Q9ES97 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rtn3Q9ES97 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Rtn3Q9ES97 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Rtn3Q9ES97 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rtn3Q9ES97 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtn3Q9ES97 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtn3Q9ES97 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rtn3Q9ES97 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rtn3Q9ES97 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rtn3Q9ES97 Zfp131-205ENSMUST00000223812 663 ntBASIC26.99■■□□□ 1.91
Rtn3Q9ES97 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Rtn3Q9ES97 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtn3Q9ES97 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rtn3Q9ES97 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rtn3Q9ES97 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.96■■□□□ 1.91
Rtn3Q9ES97 Gm16148-201ENSMUST00000119653 893 ntBASIC26.96■■□□□ 1.91
Rtn3Q9ES97 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rtn3Q9ES97 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rtn3Q9ES97 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn3Q9ES97 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn3Q9ES97 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn3Q9ES97 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn3Q9ES97 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rtn3Q9ES97 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.93■■□□□ 1.9
Rtn3Q9ES97 Peli2-204ENSMUST00000226513 1320 ntBASIC26.92■■□□□ 1.9
Rtn3Q9ES97 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rtn3Q9ES97 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rtn3Q9ES97 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn3Q9ES97 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
Rtn3Q9ES97 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtn3Q9ES97 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtn3Q9ES97 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Rtn3Q9ES97 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms